BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A03LP1|AL425308
(1019 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1299 1548 0.0
>3x_Contig1299
Length = 7525
Score = 1548 bits (776), Expect = 0.0
Identities = 785/790 (99%)
Strand = Plus / Plus
Query: 17 actacaggaactaatcaacgtaataaaaggaaaagatctcaacaagattattgataaggt 76
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 actacaggatctaatcaacgtaataaaaggaaaagatctcaacaagattattgataaggt 1925
Query: 77 acaggaatttgttaaccagggatggagtgcagcttcagcattgacccaattgcatgagta 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 acaggaatttgttaaccagggatggagtgcagcttcagcattgacccaattgcatgagta 1985
Query: 137 ttacatcaagaatgaaagcyacgatacagagtttaagaataaggtatcttggctactttt 196
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 ttacatcaagaatgaaagctacgatacagagtttaagaataaggtatcttggctactttt 2045
Query: 197 cgatagcgattccaagttaaccaacggagctagcgagcatcttcaaatgttgaacctagc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 cgatagcgattccaagttaaccaacggagctagcgagcatcttcaaatgttgaacctagc 2105
Query: 257 aatgaaggtatctcaattatataactagttagatgagtaattagatcaatgaatgcaaag 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 aatgaaggtatctcaattatataactagttagatgagtaattagatcaatgaatgcaaag 2165
Query: 317 aaaagtatcgatttacttgctacttatttagatgtaattgcgttattggcgcggatttgt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 aaaagtatcgatttacttgctacttatttagatgtaattgcgttattggcgcggatttgt 2225
Query: 377 ttggcgcggttgctgcgggtgttgttgttgctgcgggtattgttgttgctgctgctgctg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 ttggcgcggttgctgcgggtgttgttgttgctgcgggtattgttgttgctgctgctgctg 2285
Query: 437 ttgttgttgttgaaactgtagagccatcattggatggccatatgggaatgcatttggtgg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 ttgttgttgttgaaactgtagagccatcattggatggccatatgggaatgcatttggtgg 2345
Query: 497 gataccttgagctggaattggaacattttgcccattgaagttcattggcatacctgacat 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2346 gataccttgagctggaattggaacattttgcccattgaagttcattggcatacctgacat 2405
Query: 557 catataasgttgttgtgggtgggattgaggatggccttgtgaaggaacttgaccttgcgg 616
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 catataaggttgttgtgggtgggattgaggatggccttgtgaaggaacttgaccttgcgg 2465
Query: 617 accaactttacttgctggctgttttggagcgctaggaggctgctgttgtgggttacccaa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2466 accaactttacttgctggctgttttggagcgctaggaggctgctgttgtgggttacccaa 2525
Query: 677 gtgttcggggaatcctttaccgttgctcattatacgtggctgtcccattccaggtggcgg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2526 gtgttcggggaatcctttaccgttgctcattatacgtggctgtcccattccaggtggcgg 2585
Query: 737 tggaggaggcatagcatagccaccttggaaktgctgtggaggcattcccataggaggggc 796
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 2586 tggaggaggcatagcatagccaccttggaagtgctgtggaggaattcccataggaggggc 2645
Query: 797 catcatatgt 806
||||||||||
Sbjct: 2646 catcatatgt 2655
Score = 305 bits (153), Expect = 9e-83
Identities = 177/185 (95%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 837 tgcctgcattggagcacct-gattgagcaatgttttgtggtkgtttac-atgttgctgct 894
||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||
Sbjct: 2685 tgcctgcattggagcacctcgattgagcaatgttttgtggtggtttaccatgttgctgct 2744
Query: 895 gctgagcaggatgagcatkbtkgctgtgttgttgatgaatttgttgaagtttgcgttgtt 954
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 gctgagcaggatgagcatgctggctgtgttgttgatgaatttgttgaagtttgcgttgtt 2804
Query: 955 gaggttgctgctgctgctgttgaagtgggcgcsgaatgtgttgctgttgttgctgttgtt 1014
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2805 gaggttgctgctgctgctgttgatgtgggcgctgaatgtgttgctgttgttgctgttgtt 2864
Query: 1015 gctgt 1019
|||||
Sbjct: 2865 gctgt 2869
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,405
Number of Sequences: 1807
Number of extensions: 10405
Number of successful extensions: 749
Number of sequences better than 1.0e-20: 1
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)